Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911663.1_cds_XP_016461690.1_54987
CDS Infomation

[gene=LOC107784994] [db_xref=GeneID:107784994] [protein=serine/threonine-protein kinase EDR1-like isoform X3] [protein_id=XP_016461690.1] [location=complement(join(65258..65317,65463..65548,65741..65859,65968..66030,66181..66260,66507..66627,68700..68785,69483..69587,69663..69737,70570..70998))] [gbkey=CDS]
Sequence

ATGGACGTAAAAGCGCAATTGAAACGAGGAATATCGAGGCAATTCTCAACAGGATCATTG
CGAATGAGCGGTAAATTCAGTTTCAAGAGACAGAATTCATTGGATCCAAAGAACAAGAAC
ATAAGGTTCAGTTTCGGGAGGCAATCGTCACTCGATCCAATAAGGAGGAGTCCATCGTTA
GAAAATGAGACAATTAATGCAGTGCCGGAGAATTTGGATTCGACGATGCAACTGTTGTTT
TTAGCGTGTAAAGGGGACGTGAAGGGCGTAAAGGATTTGTTGGATGAAGATGATGTTGAT
GTGAATAGCATTGATTTAGATGGAAGGACTGCTTTGCATATTGCTGCGTGTGAAGGACAT
GTTGAGGTTGTGAAGCTTTTGTTGAGTCGGAAGGCTAATATTGATGCTCGTGATCGTTGG
GGAAGCACGGCTGCAGCTGATGCAAAATACTACGGAAACGTTGAAGTTTACAATATCTTA
AAGGCCCGGGGGGCCAAAGTCCCGAAAACCAGAAACACACCAATGACTGTAGCAAATCCT
CGAGAAGTTCCAGAATATGAACTCAATCCACTGGAGCTTCAAATCCGGAAAAGGGATGGA
ATCTCGAAGGGTTCATATCAAGTTGCTAAATGGAATGGGACTAAAGTTTCTGTCAAGATA
CTTGACAAGGATAGCTATTCAGACCCAGAAACCATAAATGCTTTCAAACATGAATTAACT
TTGTTGGAAAAAGTACGGCATCCTAATGTGGTTCAATTTGTTGGAGCCGTTACACAAAAT
ATACCAATGATGATAGTATTAGAGTACCATCCAAGTGGTGACCTGGGTAGCTATCTTCAG
AAGAAGGGACGTCTATCGGCTTCTAAGGTTCTAAGATTTGCACTTGATATTGCCAGGGGC
ATGAATTATCTTCATGAATGTAAACCAGACCCAATTATCCATTGCCTTTTAATGCCAAAA
AATATTTTGCTGGACAATGGAGGTCTATTGAAAATTGCAGGATTTGGTTTAACTAGATTG
TCAAACATTTCACCTGACAAAGCAAAGTTGGTGCAGCCTCAAGGCATTGACCGTGCAAGT
CCCTATACAGCACCTGAGATTTATAAAGATGAAATATTTGATAGAAGTGTGGATGTATAT
GCTTTTGGAGTATTACTTTATGAGAAAACTCTAGTCAATTCTGCCGACCTGCTGCTATAT
GATTTAGTTTACTCTGAGTTTTAG

Peptide Sequence

PEP ID

XP_016461690.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase EDR1-like isoform X3 [Nicotiana tabacum]
Sequence

MDVKAQLKRGISRQFSTGSLRMSGKFSFKRQNSLDPKNKNIRFSFGRQSSLDPIRRSPSL
ENETINAVPENLDSTMQLLFLACKGDVKGVKDLLDEDDVDVNSIDLDGRTALHIAACEGH
VEVVKLLLSRKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKVPKTRNTPMTVANP
REVPEYELNPLELQIRKRDGISKGSYQVAKWNGTKVSVKILDKDSYSDPETINAFKHELT
LLEKVRHPNVVQFVGAVTQNIPMMIVLEYHPSGDLGSYLQKKGRLSASKVLRFALDIARG
MNYLHECKPDPIIHCLLMPKNILLDNGGLLKIAGFGLTRLSNISPDKAKLVQPQGIDRAS
PYTAPEIYKDEIFDRSVDVYAFGVLLYEKTLVNSADLLLYDLVYSEF

Transcript Sequence

Gene sequence data has not been registered.